Skip to content
@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

Pinned Loading

  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 399 164

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 27 16

Repositories

Showing 10 of 524 repositories
  • npc_lims Public

    Tools to fetch and update paths, metadata and state for Mindscope Neuropixels sessions, in the cloud.

    AllenInstitute/npc_lims's past year of commit activity
    Python 0 MIT 1 5 2 Updated Oct 22, 2026
  • MultiTaskMPN Public
    AllenInstitute/MultiTaskMPN's past year of commit activity
    Python 2 2 0 0 Updated Oct 22, 2026
  • arborist Public

    Trees are the most inspiring structures

    AllenInstitute/arborist's past year of commit activity
    Python 1 MIT 0 0 3 Updated Oct 22, 2026
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    AllenInstitute/biofile-finder's past year of commit activity
    TypeScript 22 BSD-3-Clause 10 55 12 Updated Oct 22, 2026
  • ConnectsCommonConnectivity Public

    A repository to organize data models and code for creating a pilot common connectivity matrix for BRAIN CONNECTS

    AllenInstitute/ConnectsCommonConnectivity's past year of commit activity
    Jupyter Notebook 4 MIT 1 30 0 Updated Oct 21, 2026
  • biodata-schema Public

    Complete and accurate metadata for bioscience

    AllenInstitute/biodata-schema's past year of commit activity
    Python 3 MIT 0 63 1 Updated Oct 21, 2026
  • neuroanalysis Public

    Modular analysis tools for neurophysiology data

    AllenInstitute/neuroanalysis's past year of commit activity
    Python 9 MIT 11 1 3 Updated Oct 21, 2026
  • bloom-preview Public
    AllenInstitute/bloom-preview's past year of commit activity
    HTML 0 0 0 0 Updated Oct 21, 2026
  • neuroglancer Public Forked from google/neuroglancer

    WebGL-based viewer for volumetric data

    AllenInstitute/neuroglancer's past year of commit activity
    TypeScript 0 Apache-2.0 423 0 1 Updated Oct 21, 2026
  • vis Public

    Typescript packages for building big-data visualization tools & components, with examples for a variety of common data types & formats

    AllenInstitute/vis's past year of commit activity
    TypeScript 10 BSD-3-Clause 1 15 15 Updated Oct 21, 2026
View all repositories