GitHub - FertigLab/SingleCellTimeCourse: Head and neck cancer rna velocity scripts

Repository navigation

SingleCellTimeCourse

Public

Head and neck cancer rna velocity scripts

7 stars

4 watching

Name		Name	Last commit message	Last commit date
1.15_cleanDataKeepBarcodes.ipynb		1.15_cleanDataKeepBarcodes.ipynb
1.1_clean_adata.ipynb		1.1_clean_adata.ipynb
1.2_concat_adata.ipynb		1.2_concat_adata.ipynb
1.3_concat_different_samples.ipynb		1.3_concat_different_samples.ipynb
1.4_process_and_compute_velocity.ipynb		1.4_process_and_compute_velocity.ipynb
1.4_process_and_compute_velocity.md		1.4_process_and_compute_velocity.md
1_SCTCfiles.txt		1_SCTCfiles.txt
1_preprocess_adata.ipynb		1_preprocess_adata.ipynb
1_preprocess_adata.md		1_preprocess_adata.md
2.2_annotate_cells.ipynb		2.2_annotate_cells.ipynb
2_cleanFilenames.Rmd		2_cleanFilenames.Rmd
2_compute_velocity.ipynb		2_compute_velocity.ipynb
2_compute_velocity.md		2_compute_velocity.md
3_annotate_data.ipynb		3_annotate_data.ipynb
Untitled.ipynb		Untitled.ipynb
downloadAdata.sh		downloadAdata.sh
scRNAseq.R		scRNAseq.R
scc_eva.R		scc_eva.R
velocityScript.sh		velocityScript.sh
velocityscript.sh		velocityscript.sh

Head and neck cancer rna velocity scripts

7 stars

4 watching