Agent-based simulation platform for multicellular systems with cell signalling
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Feb 14, 2020 - MATLAB
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multicellular
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Exploring multicellular coordination from single-cell gene expression / multi-omics using mutlilayer network representations
rna-seq atac-seq omics single-cell treatment-effects biological-networks multilayer-networks multiomics multicellular
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Aug 31, 2026 - Python
Here you'll find the code for generating and analyzing Notch-Delta mediated pattern formation. Our results can be found in "Stochastic fluctuations promote ordered pattern formation of cells in the Notch-Delta signaling pathway" https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1010306
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Aug 10, 2022 - Jupyter Notebook
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